Additions:
~-Zhang EE et al at the Genomics Institute of the Novartis Research Foundation deposit screening data from A genome-wide RNAi screen for modifiers of the circadian clock in human cells∞ into PubChem BioAssay∞ - September 2009
Edited on 2009-11-18 10:43:20 by MiareAdmin
Additions:
~-MIARE reporting checklist v0.7.6∞
- MIARE-Tab v0.7.6∞ - a simple Microsoft Excel-based data exchange format
- VZV Kinome Screen∞ - an example tab file (v0.7.6) completed with 'real-world' data
Deletions:
~-MIARE reporting checklist v0.7.6∞ - updated September 2009
Edited on 2009-11-18 10:42:09 by MiareAdmin
Additions:
~-MIARE reporting checklist, MIARE-Tab file and completed example - updated September 2009
Deletions:
~-MIARE reporting checklist and MIARE-Tab file v0.7.6 - updated September 2009
Edited on 2009-11-18 10:41:25 by MiareAdmin
Additions:
~-MIARE reporting checklist and MIARE-Tab file v0.7.6 - updated September 2009
Deletions:
~-New MIARE reporting checklist and MIARE-Tab file v0.7.6 - updated September 2009
Edited on 2009-09-11 13:06:05 by MiareAdmin
Additions:
The MIARE reporting guidelines were initiated by members of the RNAi Global∞ in order to facilitate data sharing within the initiative. The guidelines were developed in part by a inter laboratory benchmarking study to identify minimal reporting parameters for high-throughput siRNA screens, and in part by workshops and discussions within the RNAi Global. The development of the MIARE standard is a collaborative effort driven by members of the RNAi community. We strongly encourage feedback on the draft reporting guidelines and the MIARE-Tab data exchange file. The aim is to develop these documents by consensus, so they can readily meet the needs of experimentalists who wish to share their high-throughput RNAi data in a standardised format, that allows meaningful comparisons across disparate datasets.
Deletions:
The MIARE reporting guidelines were initiated by members of the RNAi Global∞ in order to facilitate data sharing within the initiative. The guidelines were developed in part by a inter laboratory benchmarking study to identify minimal reporting parameters for high-throughput siRNA screens, and in part by workshops and discussions within the RNAi Global. The development of the MIARE standard is a collaborative effort driven by members of the RNAi community. We strongly encourage feedback on the draft reporting guidelines and the MIARE-Tab data exchange file. The aim is to develop these documents by consensus, so they can readily meet the needs of experimentalists who wish to share their high-throughput RNAi data, in a standardised format, that allows meaningful comparisons across disparate datasets.
Edited on 2009-09-11 13:04:16 by MiareAdmin
Additions:
The MIARE reporting guidelines were initiated by members of the RNAi Global∞ in order to facilitate data sharing within the initiative. The guidelines were developed in part by a inter laboratory benchmarking study to identify minimal reporting parameters for high-throughput siRNA screens, and in part by workshops and discussions within the RNAi Global. The development of the MIARE standard is a collaborative effort driven by members of the RNAi community. We strongly encourage feedback on the draft reporting guidelines and the MIARE-Tab data exchange file. The aim is to develop these documents by consensus, so they can readily meet the needs of experimentalists who wish to share their high-throughput RNAi data, in a standardised format, that allows meaningful comparisons across disparate datasets.
Deletions:
The MIARE reporting guidelines were initiated by members of the RNAi Global∞ in order to facilitate data sharing within the initiative. The guidelines were developed in part by a inter laboratory benchmarking study to identify minimal reporting parameters for high-throughput siRNA screens, and in part by workshops and discussions within the RNAi Global. The development of the MIARE standard is a collaborative effort driven by members of the RNAi community. We strongly encourage feedback on the draft reporting guidelines and the MIARE-Tab data exchange file. The aim is to develop these documents by consensus, so they can readily meet the needs of experimentalists who wish to share their high-throughput RNAi data in a standard format that allows meaningful comparisons across disparate datasets.
Edited on 2009-09-11 13:02:40 by MiareAdmin
Additions:
The MIARE reporting guidelines were initiated by members of the RNAi Global∞ in order to facilitate data sharing within the initiative. The guidelines were developed in part by a inter laboratory benchmarking study to identify minimal reporting parameters for high-throughput siRNA screens, and in part by workshops and discussions within the RNAi Global. The development of the MIARE standard is a collaborative effort driven by members of the RNAi community. We strongly encourage feedback on the draft reporting guidelines and the MIARE-Tab data exchange file. The aim is to develop these documents by consensus, so they can readily meet the needs of experimentalists who wish to share their high-throughput RNAi data in a standard format that allows meaningful comparisons across disparate datasets.
Deletions:
The MIARE reporting guidelines were initiated by members of the RNAi Global∞ in order to facilitate data sharing within the initiative. The guidelines were developed in part by a inter laboratory benchmarking study to identify minimal reporting parameters for high-throughput siRNA screens, and in part by workshops and discussions within the RNAi Global. We strongly encourage feedback on the draft reporting guidelines and MIARE-Tab file from members of the RNAi community. The aim is to develop these documents by consensus, so that they can be readily adopted by experimentalists in the real-world.
Edited on 2009-09-11 11:29:47 by MiareAdmin
Additions:
The MIARE reporting guidelines were initiated by members of the RNAi Global∞ in order to facilitate data sharing within the initiative. The guidelines were developed in part by a inter laboratory benchmarking study to identify minimal reporting parameters for high-throughput siRNA screens, and in part by workshops and discussions within the RNAi Global. We strongly encourage feedback on the draft reporting guidelines and MIARE-Tab file from members of the RNAi community. The aim is to develop these documents by consensus, so that they can be readily adopted by experimentalists in the real-world.
Deletions:
The MIARE reporting guidelines were initiated by members of the RNAi Global∞ in order to facilitate data sharing within the initiative. The guidelines were developed in part by a inter laboratory benchmarking study to identify minimal reporting parameters for high-throughput siRNA screens, and in part by workshops and discussions within the RNAi Global.
Edited on 2009-09-11 10:58:11 by MiareAdmin
Additions:
~-Previous versions of documents
Deletions:
~-Previous versions of documents PreviousVersions
Edited on 2009-09-11 10:46:12 by MiareAdmin
Additions:
~-New MIARE reporting checklist and MIARE-Tab file v0.7.6 - updated September 2009
Deletions:
~-New MIARE reporting checklist and MIARE-Tab file v0.7.6 - September 2009
Edited on 2009-09-11 10:39:10 by MiareAdmin
Additions:
~-MIARE reporting checklist v0.7.6∞ - updated September 2009
Deletions:
~-MIARE reporting checklist v0.7.6∞ - updated September 2009
Edited on 2009-09-11 10:31:42 by MiareAdmin
Additions:
~-MIARE reporting checklist v0.7.6∞ - updated September 2009
Deletions:
~-MIARE reporting checklist v0.7.6 - updated September 2009∞
Edited on 2009-09-10 13:28:20 by MiareAdmin
Additions:
~-VZV Kinome Screen - added September 2009∞ - an example tab file (v0.7.6) completed with 'real-world' data
Edited on 2009-09-04 15:47:23 by MiareAdmin
Additions:
~-Chi's Discovery on Target Meeting∞ (Oct 23-26, 2006)
Deletions:
~-MIARE poster∞ at Chi's Discovery on Target Meeting∞ (Oct 23-26, 2006)
Edited on 2009-09-04 15:41:23 by MiareAdmin
Additions:
~-Dharmacon,∞ in collaboration with NCBI,∞ upload a 'pilot' RNAi screening data set∞ into PubChem BioAssay,∞ successfully demonstrating the integration between MIARE-compliant data and PubChem∞ - March 2009
Deletions:
~-Dharmacon∞, in collaboration with NCBI∞, successfully upload a ∞ into PubChem BioAssay∞, successfully demonstrating the integration between MIARE-compliant data and PubChem∞ - March 2009
Edited on 2009-09-04 15:39:05 by MiareAdmin
Additions:
~-Dharmacon∞, in collaboration with NCBI∞, successfully upload a ∞ into PubChem BioAssay∞, successfully demonstrating the integration between MIARE-compliant data and PubChem∞ - March 2009
Edited on 2009-09-04 15:18:39 by MiareAdmin
Additions:
~-miaredev-announce@lists.sourceforge.net∞ General MIARE Announcements
Deletions:
~-miaredev-announce@lists.sourceforge.net∞. General MIARE Announcements
Edited on 2009-09-04 15:17:30 by MiareAdmin
Additions:
~-miaredev-announce@lists.sourceforge.net∞. General MIARE Announcements
You can browse∞ the list archive or subscribe/unsubscribe∞
Deletions:
~-miaredev-announce@lists.sourceforge.net∞ General MIARE Announcements
You can browse∞ the list archive or subscribe/unsubscribe∞
Edited on 2009-09-04 15:15:28 by MiareAdmin
Additions:
~-MIARE Mentioned Nature Biotechnology Editorial Standard Operating Procedures Nat Biotechnol. 2006 Nov;24(11):1299∞
Deletions:
~-miaredev-announce@lists.sourceforge.net∞ General MIARE Announcements
You can browse∞ the list archive or subscribe/unsubscribe∞
Edited on 2009-09-04 15:15:28 by MiareAdmin
Additions:
~-MIARE Mentioned Nature Biotechnology Editorial Standard Operating Procedures Nat Biotechnol. 2006 Nov;24(11):1299∞
Deletions:
~-MIARE Mentioned Nature Biotechnology Editorial Standard Operating Procedures Nat Biotechnol. 2006 Nov;24(11):1299.∞
Oldest known version of this page was edited on 2009-09-04 15:14:39 by MiareAdmin []
Page view:
Introduction
Minimum Information About an RNAi Experiment (MIARE) is a set of reporting guidelines which describes the minimum information that should be reported about an RNAi experiment to enable the unambiguous interpretation and reproduction of the results. MIARE forms part of a larger effort to develop RNAi data standards that include a data model, data exchange format, Controlled Vocabulary and supporting software tools.
Background
The MIARE reporting guidelines were initiated by members of the RNAi Global∞ in order to facilitate data sharing within the initiative. The guidelines were developed in part by a inter laboratory benchmarking study to identify minimal reporting parameters for high-throughput siRNA screens, and in part by workshops and discussions within the RNAi Global.
News
- New MIARE reporting checklist and MIARE-Tab file v0.7.6 - September 2009
- MIARE talk by Dr. Anastasia Khvorova∞ at Keystone Symposia∞
- MIARE registered with MIBBI∞
- MIARE Mentioned Nature Biotechnology Editorial Standard Operating Procedures Nat Biotechnol. 2006 Nov;24(11):1299.∞
- MIARE poster∞ at Chi's Discovery on Target Meeting∞ (Oct 23-26, 2006).
- MIARE mentioned in publication: Standards for Systems Biology Nat Rev Genet. 2006 Aug;7(8):593-605.∞
- RNAi Global Initiative Members Meet to Establish Collaboration and Accelerate Biomedical Discovery Using Genome-Wide siRNA Library∞
Minimal Information About An RNAi Experiment (MIARE) – Proposed Reporting Guidelines
Current Documents
- MIARE reporting checklist v0.7.6 - updated September 2009∞
- MIARE-Tab v0.7.6 - updated September 2009∞ - a simple Microsoft Excel-based data exchange format
- Previous versions of documents PreviousVersions
Mailing Lists
- miaredev-announce@lists.sourceforge.net∞ General MIARE Announcements
- miare-objectmodel@lists.sourceforge.net∞. Discussion list for MIARE object model
Forums
Links
- Minimum Information Resources
- MIBBI, Minimum Information for Biological and Biomedical Investigations (MI Checklist Portal)
- MIAME, gene expression microarray
- MIAME-env, environmental genomics
- MIAME-nut, nutrional genomics
- MIAME-tox, toxogenomics
- MIAME-Plant
- MIAPE, proteomic experiments
- MIAPE CC, reporting requirements for column chromatography
- MIAPE CE, reporting requirements for capillary electrophoresis
- MIAPE-MS, mass spectrometry
- MIAPE SP, reporting requirements for sample preparation and handling
- MIAPE-GE, gel electrophoresis
- MIAPE GI, reporting requirements for gel informatics
- MIMIX, Molecular Interaction experiment
- MIACA, cell based assay
- MIGS, genome sequence
- MIFACE, flow cytometry
- MISFISHIE, In Situ Hybridization and Immunohistochemistry Experiments
- MIAPA, Phylogenetic Analysis
- MIAO, ORF
- MIAMET, METabolomics experiment
- MIAFGE, Functional Genomics Experiment
- MIRIAM, Minimum information requested in the annotation of biochemical models
- Data Standards
- Omics A Journal of Integrative Biology, A Special Issue on Data Standards
- RNA Interference
- RNAi Global, The RNAi Global Initiative
- NCBI Gene Silencing Resource, NCBI database of RNAi reagents and experimental results generated using those reagents
- The RNAi Web, web resource for RNAi
- Databases
- PubChem, an NCBI database storing information from screens on the biological activities of small molecules
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